CONN jobmanager help


manages parallelization options in CONN
conn_jobmanager; launches GUI displaying pending jobs (in currently open project, or alternatively in current directory) conn_jobmanager all; launches GUI displaying finished or pending jobs conn_jobmanager settings; launches GUI display configuration settings


conn_jobmanager report; if there is a pending job, displays status of each of the individual nodes in this job conn_jobmanager restartif error; if there is a pending job, resubmits any nodes with status label "error" Other valid status labels are: 'finished','finishing','running','submitted','canceled','stopping','stopped','queued','error','failed','crashed' conn_jobmanager cancelif error; if there is a pending job, cancels any nodes with status label "error" Other valid status labels are: 'finished','finishing','running','submitted','canceled','stopping','stopped','queued','error','failed','crashed' conn_jobmanager finish; if there is a pending job and all of its nodes have either finished or have been canceled, merges this job results with its parent conn project conn_jobmanager cancel; if there is a pending job, cancels all unfinished nodes and then finishes this job conn_jobmanager delete; if there is a pending job, stop all nodes and delete this job


conn_jobmanager profiles lists available configuration profile names (by default: Grid Engine, Slurm, PBS, LSF, Condor, Background process) conn_jobmanager save all|current saves current profile settings for all users or for current user only conn_jobmanager test tests configuration profile conn_jobmanager setdefault PROFILENAME [save all|current] sets default configuration profile to PROFILENAME conn_jobmanager options FIELDNAME FIELDVALUE [save all|current]; modifies individual settings in current profile e.g. conn_jobmanager options cmd_submitoptions '-l h_rt=48:00:00'; valid FIELDNAMES are: name : profile name comments : profile comments/label cmd_submit : command used to submit a job cmd_deletejob : command used to delete a job cmd_checkstatus : command used to check a job's status cmd_submitoptions : in-line optional arguments (in OPT parameter within cmd_submit) cmd_submitoptions_infile : in-file optional arguments (in submitted script) cmd_rundeployed : nodes use pre-compiled CONN only cmd_deployedfile : pre-compiled CONN executable location (fullpath) cmd_checkstatus_automatic : check job-status automatically cmd_submit_delay : delay time (in seconds) between multiple submit commands cmd_submitoptions_example : example of submit options

see also: description of cluster/HPC configuration options in CONN